Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 MTCYBP19-201ENST00000517463 1124 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AL391597.1-201ENST00000618707 694 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 RNA5SP105-201ENST00000391123 113 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC234779.1-201ENST00000425910 285 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AL049745.1-201ENST00000433953 286 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 RPL10P17-201ENST00000453852 316 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 RN7SL826P-201ENST00000479724 288 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 NDUFB4P12-201ENST00000513465 390 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC008147.3-201ENST00000548666 354 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC020914.4-201ENST00000597690 277 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AL031666.3-201ENST00000609320 1006 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC006065.6-201ENST00000625201 545 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC107021.2-201ENST00000567714 2095 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AL627171.1-201ENST00000618845 1308 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC083899.2-201ENST00000423285 1376 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC017007.4-201ENST00000503353 1352 ntBASIC4.64□□□□□ -1.67
CCDC50Q8IVM0 AC010300.1-201ENST00000600671 5134 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC027287.1-201ENST00000553115 1453 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 RNU6-891P-201ENST00000384280 111 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 MIR659-201ENST00000384963 97 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 SNRPFP1-201ENST00000414761 252 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AP001324.1-201ENST00000428553 399 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 VN1R54P-201ENST00000435210 1049 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 YWHAZP2-201ENST00000440317 728 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 RPL23AP43-201ENST00000446445 471 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC037198.2-201ENST00000478845 733 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AP001781.1-201ENST00000530977 207 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 HMGB1P50-201ENST00000605814 607 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC023813.4-201ENST00000607580 580 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 FAM25E-202ENST00000608562 189 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AL356274.1-201ENST00000617064 410 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 AC091953.3-201ENST00000623220 236 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 CASC19-222ENST00000641321 1173 ntBASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC50Q8IVM0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 RNU1-15P-201ENST00000353977 144 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC104297.1-201ENST00000393779 870 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL360081.1-201ENST00000428299 555 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms