Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC239798.3-201ENST00000454459 408 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC079804.1-201ENST00000461922 436 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 TRBV8-1-201ENST00000481590 279 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC016687.1-201ENST00000482574 353 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 RN7SL604P-201ENST00000492589 296 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC146944.2-203ENST00000502493 354 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 NPM1P41-201ENST00000512920 831 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC139495.1-202ENST00000513164 354 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 NDUFB4P12-201ENST00000513465 390 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 DYNLL1P4-201ENST00000549314 266 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AL352979.3-201ENST00000553515 247 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 HMGB2P1-201ENST00000591146 634 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCS2P54868 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 AL451049.1-201ENST00000608672 497 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC008833.1-201ENST00000611633 691 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC112200.1-201ENST00000625015 234 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC008013.2-202ENST00000637965 364 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCS2P54868 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS2P54868 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCS2P54868 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
HMGCS2P54868 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS2P54868 MIR921-201ENST00000401133 56 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS2P54868 AL451062.2-201ENST00000427515 271 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 SNRPFP2-201ENST00000440710 251 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS2P54868 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 AC022034.3-201ENST00000471393 478 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 AF213884.1-201ENST00000488102 463 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HMGCS2P54868 AL133372.1-201ENST00000493565 745 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 AC113398.2-201ENST00000507630 558 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS2P54868 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS2P54868 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS2P54868 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HMGCS2P54868 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS2P54868 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS2P54868 AC010201.1-201ENST00000605051 540 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 AC020658.4-201ENST00000613987 684 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS2P54868 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.94□□□□□ -1.62
HMGCS2P54868 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.94□□□□□ -1.62
HMGCS2P54868 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCS2P54868 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
HMGCS2P54868 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS2P54868 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS2P54868 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCS2P54868 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS2P54868 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS2P54868 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGCS2P54868 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HMGCS2P54868 MTCO1P8-201ENST00000416914 1523 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS2P54868 AL731532.2-201ENST00000623542 1953 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 RN7SKP159-201ENST00000410657 292 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 LINC01881-201ENST00000416103 412 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.93□□□□□ -1.62
HMGCS2P54868 EIF1P3-201ENST00000423841 334 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 OR8F1P-201ENST00000425243 930 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 ARL4AP4-201ENST00000434170 518 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 RPL23AP37-201ENST00000479658 549 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 AC010460.1-201ENST00000507087 466 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.93□□□□□ -1.62
HMGCS2P54868 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HMGCS2P54868 CUL4AP1-201ENST00000514750 1863 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.93□□□□□ -1.62
HMGCS2P54868 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.93□□□□□ -1.62
HMGCS2P54868 AL359219.2-201ENST00000555184 348 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.93□□□□□ -1.62
HMGCS2P54868 MIR4444-1-201ENST00000581696 74 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 MIR4444-2-201ENST00000584390 74 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 AC107905.1-201ENST00000616204 426 ntBASIC4.93□□□□□ -1.62
HMGCS2P54868 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HMGCS2P54868 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGCS2P54868 FAM91A3P-201ENST00000456826 2544 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms