Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.68□□□□□ -1.5
TM4SF4P48230 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC010329.2-201ENST00000595195 2737 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TM4SF4P48230 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF4P48230 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 RNA5SP28-201ENST00000363841 119 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF4P48230 RPL6P29-201ENST00000414863 865 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 OR13Z1P-201ENST00000416141 834 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 TAF13P2-201ENST00000416876 286 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF4P48230 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 RRM2P4-201ENST00000441721 562 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC099063.2-201ENST00000446360 662 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC005912.1-201ENST00000495392 255 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC010627.1-201ENST00000503819 1294 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF4P48230 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.67□□□□□ -1.5
TM4SF4P48230 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AC087897.1-201ENST00000550134 156 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF4P48230 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 AC027455.1-201ENST00000574104 594 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AL352984.2-202ENST00000613699 155 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AC015712.7-201ENST00000615211 635 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 AP001005.3-201ENST00000622049 129 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF4P48230 AC034229.5-201ENST00000624258 185 ntBASIC5.67□□□□□ -1.5
TM4SF4P48230 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF4P48230 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF4P48230 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 AL731566.1-201ENST00000620490 1937 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TM4SF4P48230 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 AC006042.3-201ENST00000454684 1469 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TM4SF4P48230 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 SNORA70.10-201ENST00000384515 134 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC093719.1-202ENST00000392735 373 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 SNORA11C-201ENST00000408532 129 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 MTATP6P20-201ENST00000414147 562 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 RPS26P38-201ENST00000414476 348 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 BTF3P8-201ENST00000414577 526 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 RPL36AP36-201ENST00000418616 301 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF4P48230 AC073069.1-201ENST00000428657 441 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 MTCYBP15-201ENST00000433123 1127 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC092013.1-201ENST00000438795 332 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 CDC42P1-201ENST00000456658 548 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC005229.2-201ENST00000456995 399 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 SNORA84-201ENST00000459229 133 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.66□□□□□ -1.5
TM4SF4P48230 RPL21P131-201ENST00000497298 483 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 RPSAP51-201ENST00000497462 645 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 AC020593.1-201ENST00000507399 299 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 MTCO1P35-201ENST00000515270 228 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 RNU2-30P-201ENST00000516209 141 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 AC069061.3-201ENST00000582254 823 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC022726.1-201ENST00000587475 207 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.66□□□□□ -1.5
TM4SF4P48230 PSMA6P4-201ENST00000603247 718 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF4P48230 AL157392.4-201ENST00000609756 345 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 AL353726.1-201ENST00000614041 1000 ntBASIC5.66□□□□□ -1.5
TM4SF4P48230 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF4P48230 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TM4SF4P48230 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TM4SF4P48230 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF4P48230 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms