Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL035407.2-201ENST00000454090 378 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC108751.2-201ENST00000469993 231 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC006511.1-201ENST00000470614 315 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 RPL36AP41-201ENST00000493820 306 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC138938.1-201ENST00000515431 782 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 IGKV2-36-201ENST00000519999 223 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 AP003717.3-201ENST00000544832 1180 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD13P35453 RN7SL652P-201ENST00000577769 300 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 MIR4480-201ENST00000582492 71 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC125494.3-201ENST00000602759 455 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC098935.2-201ENST00000604222 466 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXD13P35453 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD13P35453 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
HOXD13P35453 CR392039.4-201ENST00000624968 501 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 OR2L1P-202ENST00000641567 1023 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HOXD13P35453 MFSD8-213ENST00000641134 1327 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXD13P35453 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 AC135352.1-201ENST00000506173 1418 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD13P35453 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD13P35453 AL592494.2-201ENST00000425455 1548 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD13P35453 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD13P35453 AL731566.1-201ENST00000620490 1937 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD13P35453 AC092162.3-201ENST00000624511 1624 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXD13P35453 AL590240.1-201ENST00000334118 313 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 SNORA63.3-201ENST00000362682 132 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 HMGB3P31-201ENST00000413333 595 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 RPL12P28-201ENST00000430852 489 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD13P35453 NPM1P33-201ENST00000438918 872 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 TPTE2P6-202ENST00000445572 1007 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD13P35453 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 AL591473.1-201ENST00000464297 313 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 TRBV8-2-201ENST00000475637 270 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC011005.3-201ENST00000491624 395 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD13P35453 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 C1DP5-201ENST00000525775 383 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD13P35453 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD13P35453 AC079075.1-201ENST00000559543 878 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 AC091042.1-201ENST00000579213 173 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD13P35453 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXD13P35453 AC068790.7-201ENST00000602347 528 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC006946.3-201ENST00000609791 756 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC022106.2-201ENST00000620114 757 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 MIR7703-201ENST00000620784 77 ntBASIC5.13□□□□□ -1.59
HOXD13P35453 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD13P35453 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD13P35453 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD13P35453 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD13P35453 SDAD1P1-202ENST00000524156 2051 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD13P35453 AC114546.3-201ENST00000623582 1734 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD13P35453 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXD13P35453 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD13P35453 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD13P35453 AL035419.1-201ENST00000397037 564 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 MIR1271-201ENST00000408537 86 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 BX664727.1-201ENST00000416024 466 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 ATG4AP1-201ENST00000416893 538 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 MTCO2P1-201ENST00000424648 477 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 RPS27P18-201ENST00000431701 247 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HOXD13P35453 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 AL031584.1-201ENST00000447169 754 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 RPL37P3-201ENST00000456825 293 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 RNA5SP103-201ENST00000459503 118 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD13P35453 AL161747.1-201ENST00000480068 358 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC231760.1-201ENST00000498002 260 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 PPM1AP1-201ENST00000502740 1135 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
HOXD13P35453 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms