Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 VN1R32P-201ENST00000452234 905 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 RPS5P7-201ENST00000456664 608 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 EIF2S2P4-201ENST00000461070 984 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC006517.1-201ENST00000480485 328 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC069499.1-201ENST00000489433 509 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AL160290.3-201ENST00000604869 165 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC100847.1-201ENST00000611316 481 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AL645927.2-201ENST00000618350 349 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC138907.10-201ENST00000623708 983 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 SPATA2P1-201ENST00000431223 2055 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMAP28067 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMAP28067 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMAP28067 MFSD8-220ENST00000641243 1422 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 SNORA62.2-201ENST00000364672 152 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 SNORA17A-201ENST00000391185 133 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 RN7SKP222-201ENST00000410651 315 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC115285.1-201ENST00000424879 736 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC009965.2-201ENST00000425328 970 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC097523.2-201ENST00000435551 652 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 RPL23AP89-201ENST00000439324 255 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AURKAPS1-201ENST00000451805 1212 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 HIGD1AP8-201ENST00000453927 274 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AURKAPS2-201ENST00000454983 333 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AP000926.1-201ENST00000479573 241 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 RNU4-18P-201ENST00000516751 149 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 RNA5SP143-201ENST00000516936 115 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 NARSP2-201ENST00000518524 679 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC091515.1-201ENST00000548110 679 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC004825.1-201ENST00000555068 586 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 NDUFA5P11-201ENST00000567995 343 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC009101.1-201ENST00000568135 242 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 RN7SL652P-201ENST00000577769 300 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 AL391358.1-201ENST00000605342 190 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 EIF3FP1-201ENST00000613970 806 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMAP28067 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 SNORA17.5-201ENST00000630429 132 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMAP28067 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 BDP1P-201ENST00000582658 1990 ntBASIC3.81□□□□□ -1.8
HLA-DMAP28067 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMAP28067 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 RN7SKP162-201ENST00000363605 345 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 MIR143-201ENST00000385300 106 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 RAD23BP1-201ENST00000421404 1227 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 OR6C71P-201ENST00000432580 913 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 ATP5HP2-201ENST00000433885 485 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 PA2G4P6-201ENST00000438325 1197 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms