Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNA5SP279-201ENST00000365513 117 ntBASIC7.12□□□□□ -1.27
RFX1P22670 PEX12P1-201ENST00000400284 1048 ntBASIC7.12□□□□□ -1.27
RFX1P22670 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RFX1P22670 AL357752.1-201ENST00000412817 349 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 BX295541.1-201ENST00000417774 250 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.12□□□□□ -1.27
RFX1P22670 AC073464.1-201ENST00000429823 534 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC023347.2-201ENST00000433994 462 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC114755.5-201ENST00000447760 831 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AL121578.2-201ENST00000448797 447 ntBASIC7.12□□□□□ -1.27
RFX1P22670 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 AC026410.2-201ENST00000460281 156 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.12□□□□□ -1.27
RFX1P22670 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.12□□□□□ -1.27
RFX1P22670 AC010493.1-201ENST00000513479 292 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC104986.1-201ENST00000517978 436 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX1P22670 AL121594.2-201ENST00000541658 472 ntBASIC7.12□□□□□ -1.27
RFX1P22670 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX1P22670 AL390208.1-201ENST00000605885 644 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC009994.1-201ENST00000606889 253 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.12□□□□□ -1.27
RFX1P22670 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AL352984.2-202ENST00000613699 155 ntBASIC7.12□□□□□ -1.27
RFX1P22670 Y_RNA.804-201ENST00000615262 101 ntBASIC7.12□□□□□ -1.27
RFX1P22670 AC099654.10-201ENST00000640395 161 ntBASIC7.12□□□□□ -1.27
RFX1P22670 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 SMG1P5-202ENST00000529428 4219 ntBASIC7.12□□□□□ -1.27
RFX1P22670 SMG1P2-201ENST00000566127 4221 ntBASIC7.12□□□□□ -1.27
RFX1P22670 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 AC008957.3-201ENST00000624112 2242 ntBASIC7.12□□□□□ -1.27
RFX1P22670 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.12□□□□□ -1.27
RFX1P22670 AC007406.5-201ENST00000570140 3170 ntBASIC7.12□□□□□ -1.27
RFX1P22670 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 AC107081.3-201ENST00000612715 2034 ntBASIC7.11□□□□□ -1.27
RFX1P22670 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.11□□□□□ -1.27
RFX1P22670 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.11□□□□□ -1.27
RFX1P22670 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RFX1P22670 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RFX1P22670 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 RPL23AP57-201ENST00000332361 466 ntBASIC7.11□□□□□ -1.27
RFX1P22670 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 RNU6-921P-201ENST00000384361 107 ntBASIC7.11□□□□□ -1.27
RFX1P22670 MT-TL1-201ENST00000386347 75 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AL360271.1-201ENST00000395679 510 ntBASIC7.11□□□□□ -1.27
RFX1P22670 RNU4-55P-201ENST00000410731 137 ntBASIC7.11□□□□□ -1.27
RFX1P22670 PRELID3BP11-201ENST00000414230 479 ntBASIC7.11□□□□□ -1.27
RFX1P22670 TPMTP2-201ENST00000414372 726 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC016769.2-201ENST00000414815 475 ntBASIC7.11□□□□□ -1.27
RFX1P22670 OR51A5P-201ENST00000415429 942 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.11□□□□□ -1.27
RFX1P22670 AL445669.1-201ENST00000426743 755 ntBASIC7.11□□□□□ -1.27
RFX1P22670 ELOCP14-201ENST00000428070 331 ntBASIC7.11□□□□□ -1.27
RFX1P22670 RPS3AP54-201ENST00000435535 734 ntBASIC7.11□□□□□ -1.27
RFX1P22670 RSU1P2-202ENST00000437884 485 ntBASIC7.11□□□□□ -1.27
RFX1P22670 ELOCP7-201ENST00000439968 331 ntBASIC7.11□□□□□ -1.27
RFX1P22670 RPL23AP16-201ENST00000441715 421 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC7.11□□□□□ -1.27
RFX1P22670 UBBP5-201ENST00000446970 266 ntBASIC7.11□□□□□ -1.27
RFX1P22670 PPIAP20-201ENST00000449839 135 ntBASIC7.11□□□□□ -1.27
RFX1P22670 TVP23CP1-201ENST00000450317 639 ntBASIC7.11□□□□□ -1.27
RFX1P22670 SEPT7P3-201ENST00000455017 621 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC099563.1-201ENST00000456086 418 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 BTF3P5-201ENST00000457252 467 ntBASIC7.11□□□□□ -1.27
RFX1P22670 MTCO1P42-201ENST00000457379 726 ntBASIC7.11□□□□□ -1.27
RFX1P22670 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.11□□□□□ -1.27
RFX1P22670 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 AC094085.1-201ENST00000468914 584 ntBASIC7.11□□□□□ -1.27
RFX1P22670 RPL23AP64-201ENST00000469465 435 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AP000893.1-201ENST00000474462 794 ntBASIC7.11□□□□□ -1.27
RFX1P22670 RPS3AP14-201ENST00000483907 780 ntBASIC7.11□□□□□ -1.27
RFX1P22670 IGHV1-14-201ENST00000523391 241 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC109635.3-201ENST00000529536 185 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC104383.1-201ENST00000530297 370 ntBASIC7.11□□□□□ -1.27
RFX1P22670 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.11□□□□□ -1.27
RFX1P22670 C8orf59P2-201ENST00000603441 271 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC112230.1-201ENST00000604342 547 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC018695.5-201ENST00000605872 315 ntBASIC7.11□□□□□ -1.27
RFX1P22670 MIR6721-201ENST00000617181 87 ntBASIC7.11□□□□□ -1.27
RFX1P22670 AC012150.2-201ENST00000621300 544 ntBASIC7.11□□□□□ -1.27
RFX1P22670 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.11□□□□□ -1.27
RFX1P22670 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
RFX1P22670 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RFX1P22670 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.11□□□□□ -1.27
RFX1P22670 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms