Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFP01375 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFP01375 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
TNFP01375 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
TNFP01375 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 RNA5SP130-201ENST00000364431 114 ntBASIC4.13□□□□□ -1.75
TNFP01375 RNU1-64P-201ENST00000365443 163 ntBASIC4.13□□□□□ -1.75
TNFP01375 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 MIR195-201ENST00000385194 87 ntBASIC4.13□□□□□ -1.75
TNFP01375 SNORD96B-201ENST00000386148 79 ntBASIC4.13□□□□□ -1.75
TNFP01375 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 MTCYBP21-201ENST00000443300 1113 ntBASIC4.13□□□□□ -1.75
TNFP01375 AC020898.1-201ENST00000474167 787 ntBASIC4.13□□□□□ -1.75
TNFP01375 AL132838.2-201ENST00000492041 314 ntBASIC4.13□□□□□ -1.75
TNFP01375 HPRT1P2-201ENST00000505250 544 ntBASIC4.13□□□□□ -1.75
TNFP01375 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 HMGB1P19-201ENST00000517578 577 ntBASIC4.13□□□□□ -1.75
TNFP01375 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFP01375 AC107993.1-201ENST00000591343 684 ntBASIC4.13□□□□□ -1.75
TNFP01375 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFP01375 SNX18P1Y-201ENST00000616231 511 ntBASIC4.13□□□□□ -1.75
TNFP01375 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 IQCB2P-201ENST00000401788 1633 ntBASIC4.13□□□□□ -1.75
TNFP01375 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFP01375 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TNFP01375 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.12□□□□□ -1.75
TNFP01375 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
TNFP01375 MIR372-201ENST00000362225 67 ntBASIC4.12□□□□□ -1.75
TNFP01375 RNA5SP388-201ENST00000362584 119 ntBASIC4.12□□□□□ -1.75
TNFP01375 RNA5SP283-201ENST00000365604 119 ntBASIC4.12□□□□□ -1.75
TNFP01375 BMS1P3-201ENST00000372011 932 ntBASIC4.12□□□□□ -1.75
TNFP01375 VDAC2P1-201ENST00000399358 958 ntBASIC4.12□□□□□ -1.75
TNFP01375 PPIAP31-201ENST00000405422 495 ntBASIC4.12□□□□□ -1.75
TNFP01375 MIR1179-201ENST00000408703 91 ntBASIC4.12□□□□□ -1.75
TNFP01375 AC009237.10-201ENST00000414112 510 ntBASIC4.12□□□□□ -1.75
TNFP01375 AL117339.2-201ENST00000430475 180 ntBASIC4.12□□□□□ -1.75
TNFP01375 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFP01375 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFP01375 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFP01375 AL589765.3-201ENST00000446084 462 ntBASIC4.12□□□□□ -1.75
TNFP01375 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFP01375 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFP01375 RPL7AP28-201ENST00000464513 571 ntBASIC4.12□□□□□ -1.75
TNFP01375 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFP01375 RN7SL604P-201ENST00000492589 296 ntBASIC4.12□□□□□ -1.75
TNFP01375 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
TNFP01375 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.12□□□□□ -1.75
TNFP01375 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFP01375 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFP01375 RPL21P7-201ENST00000557463 483 ntBASIC4.12□□□□□ -1.75
TNFP01375 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFP01375 AC093227.2-201ENST00000589357 285 ntBASIC4.12□□□□□ -1.75
TNFP01375 SNORD91B-202ENST00000608459 222 ntBASIC4.12□□□□□ -1.75
TNFP01375 AL353726.1-201ENST00000614041 1000 ntBASIC4.12□□□□□ -1.75
TNFP01375 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
TNFP01375 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFP01375 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFP01375 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
TNFP01375 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFP01375 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TNFP01375 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFP01375 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFP01375 OR11H4-201ENST00000315409 1082 ntBASIC4.11□□□□□ -1.75
TNFP01375 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFP01375 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFP01375 KCTD10P1-201ENST00000434203 625 ntBASIC4.11□□□□□ -1.75
TNFP01375 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFP01375 AL450263.2-201ENST00000439400 589 ntBASIC4.11□□□□□ -1.75
TNFP01375 AL162151.2-201ENST00000448875 158 ntBASIC4.11□□□□□ -1.75
TNFP01375 ABCF2P2-201ENST00000450549 296 ntBASIC4.11□□□□□ -1.75
TNFP01375 RPL5P32-201ENST00000454085 879 ntBASIC4.11□□□□□ -1.75
TNFP01375 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFP01375 RNA5SP246-201ENST00000458909 119 ntBASIC4.11□□□□□ -1.75
TNFP01375 DYNLL1P4-201ENST00000549314 266 ntBASIC4.11□□□□□ -1.75
TNFP01375 MIR4286-201ENST00000580651 93 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms