Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 VN1R81P-201ENST00000602085 372 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AC128687.2-201ENST00000609657 566 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 MIR7702-201ENST00000621931 59 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AP003499.2-201ENST00000624100 483 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.36□□□□□ -1.71
SHOX2O60902 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.36□□□□□ -1.71
SHOX2O60902 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.36□□□□□ -1.71
SHOX2O60902 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.36□□□□□ -1.71
SHOX2O60902 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SHOX2O60902 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.35□□□□□ -1.71
SHOX2O60902 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHOX2O60902 OR11H4-201ENST00000315409 1082 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 RNU1-18P-201ENST00000363062 164 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHOX2O60902 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SHOX2O60902 AP002530.1-201ENST00000405705 684 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 VN1R31P-201ENST00000417498 730 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AL590762.4-201ENST00000425885 253 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.35□□□□□ -1.71
SHOX2O60902 MTCO1P54-201ENST00000430139 712 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC006466.1-201ENST00000438721 289 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC092647.3-201ENST00000443044 633 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 MTND4LP12-201ENST00000448237 295 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.35□□□□□ -1.71
SHOX2O60902 AURKAPS2-201ENST00000454983 333 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.35□□□□□ -1.71
SHOX2O60902 AC096741.1-201ENST00000472250 846 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.35□□□□□ -1.71
SHOX2O60902 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.35□□□□□ -1.71
SHOX2O60902 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.35□□□□□ -1.71
SHOX2O60902 NDUFB4P12-201ENST00000513465 390 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 MTCYBP19-201ENST00000517463 1124 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.35□□□□□ -1.71
SHOX2O60902 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.35□□□□□ -1.71
SHOX2O60902 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.35□□□□□ -1.71
SHOX2O60902 GCSHP4-201ENST00000538792 439 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 AC234775.3-201ENST00000564612 656 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.35□□□□□ -1.71
SHOX2O60902 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.35□□□□□ -1.71
SHOX2O60902 AC110741.2-201ENST00000605278 268 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC009704.2-201ENST00000618739 483 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 MIR6891-201ENST00000618788 93 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 AC095038.2-201ENST00000621464 1070 ntBASIC4.35□□□□□ -1.71
SHOX2O60902 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHOX2O60902 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.35□□□□□ -1.71
SHOX2O60902 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHOX2O60902 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHOX2O60902 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.35□□□□□ -1.71
SHOX2O60902 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.34□□□□□ -1.71
SHOX2O60902 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHOX2O60902 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHOX2O60902 RN7SKP95-201ENST00000362860 303 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 U8.4-201ENST00000363626 134 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SHOX2O60902 HMGN2P8-201ENST00000391458 268 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 RPL17P50-201ENST00000396131 546 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHOX2O60902 Z98745.1-201ENST00000402553 494 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 RN7SKP267-201ENST00000410381 285 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.34□□□□□ -1.71
SHOX2O60902 RAB9AP5-201ENST00000437794 597 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.34□□□□□ -1.71
SHOX2O60902 RAB9AP2-201ENST00000443911 597 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.34□□□□□ -1.71
SHOX2O60902 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC147055.3-201ENST00000510547 851 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 AC007016.1-201ENST00000512110 244 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 IGKV2-38-201ENST00000517443 247 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC107918.3-201ENST00000533272 382 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC025423.2-201ENST00000537570 439 ntBASIC4.34□□□□□ -1.71
SHOX2O60902 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.34□□□□□ -1.71
SHOX2O60902 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.34□□□□□ -1.71
SHOX2O60902 RN7SL652P-201ENST00000577769 300 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms