Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.98□□□□□ -1.77
SGCEO43556 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 AC134882.1-201ENST00000603738 1676 ntBASIC3.98□□□□□ -1.77
SGCEO43556 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 AL592437.2-201ENST00000421655 2434 ntBASIC3.98□□□□□ -1.77
SGCEO43556 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 SNORA58B-201ENST00000364259 136 ntBASIC3.98□□□□□ -1.77
SGCEO43556 RNU6-304P-201ENST00000364855 107 ntBASIC3.98□□□□□ -1.77
SGCEO43556 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.98□□□□□ -1.77
SGCEO43556 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 RN7SKP106-201ENST00000410832 272 ntBASIC3.98□□□□□ -1.77
SGCEO43556 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 SEC63P1-201ENST00000425785 1258 ntBASIC3.98□□□□□ -1.77
SGCEO43556 RPS12P10-201ENST00000427031 377 ntBASIC3.98□□□□□ -1.77
SGCEO43556 RPL12P28-201ENST00000430852 489 ntBASIC3.98□□□□□ -1.77
SGCEO43556 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.98□□□□□ -1.77
SGCEO43556 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.98□□□□□ -1.77
SGCEO43556 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.98□□□□□ -1.77
SGCEO43556 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SGCEO43556 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 RNA5SP446-201ENST00000515955 82 ntBASIC3.98□□□□□ -1.77
SGCEO43556 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.98□□□□□ -1.77
SGCEO43556 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.98□□□□□ -1.77
SGCEO43556 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.98□□□□□ -1.77
SGCEO43556 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.98□□□□□ -1.77
SGCEO43556 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.98□□□□□ -1.77
SGCEO43556 AL645927.2-201ENST00000618350 349 ntBASIC3.98□□□□□ -1.77
SGCEO43556 AP006248.2-201ENST00000623309 592 ntBASIC3.98□□□□□ -1.77
SGCEO43556 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.98□□□□□ -1.77
SGCEO43556 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
SGCEO43556 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SGCEO43556 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 AC125257.1-201ENST00000560400 2930 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 AC021146.4-201ENST00000309229 279 ntBASIC3.97□□□□□ -1.77
SGCEO43556 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SGCEO43556 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 AL139128.1-201ENST00000413921 941 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 DYNLL1P7-201ENST00000429273 258 ntBASIC3.97□□□□□ -1.77
SGCEO43556 USP9YP9-201ENST00000429406 715 ntBASIC3.97□□□□□ -1.77
SGCEO43556 BX119904.1-201ENST00000432026 348 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AC093716.1-201ENST00000435923 377 ntBASIC3.97□□□□□ -1.77
SGCEO43556 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 AL772161.1-201ENST00000439130 476 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AC239809.1-201ENST00000450470 217 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.97□□□□□ -1.77
SGCEO43556 AC021205.1-201ENST00000468797 348 ntBASIC3.97□□□□□ -1.77
SGCEO43556 MTND6P6-201ENST00000478031 263 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AL592156.1-201ENST00000508758 304 ntBASIC3.97□□□□□ -1.77
SGCEO43556 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 IGHV3-63-201ENST00000518422 341 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.97□□□□□ -1.77
SGCEO43556 AC012213.4-201ENST00000606457 354 ntBASIC3.97□□□□□ -1.77
SGCEO43556 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.97□□□□□ -1.77
SGCEO43556 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.97□□□□□ -1.77
SGCEO43556 LINC01808-202ENST00000641680 1116 ntBASIC3.97□□□□□ -1.77
SGCEO43556 MFSD8-242ENST00000641690 4199 ntBASIC3.97□□□□□ -1.77
SGCEO43556 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SGCEO43556 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
SGCEO43556 NXPH1-205ENST00000602349 1953 ntBASIC3.96□□□□□ -1.77
SGCEO43556 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.96□□□□□ -1.78
SGCEO43556 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 AC139769.1-204ENST00000472297 1931 ntBASIC3.96□□□□□ -1.78
SGCEO43556 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SGCEO43556 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SGCEO43556 RNU1-63P-201ENST00000383902 164 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RNA5SP397-201ENST00000391323 118 ntBASIC3.96□□□□□ -1.78
SGCEO43556 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SGCEO43556 GSTM3P2-201ENST00000412746 530 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AC062016.2-201ENST00000420950 676 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RAD23BP1-201ENST00000421404 1227 ntBASIC3.96□□□□□ -1.78
SGCEO43556 MTCO3P21-201ENST00000430791 643 ntBASIC3.96□□□□□ -1.78
SGCEO43556 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.96□□□□□ -1.78
SGCEO43556 YWHAZP2-201ENST00000440317 728 ntBASIC3.96□□□□□ -1.78
SGCEO43556 RPL23AP93-201ENST00000440847 484 ntBASIC3.96□□□□□ -1.78
SGCEO43556 AL162591.2-201ENST00000449634 317 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms