Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Gm27275-201ENSMUST00000184318 272 ntBASIC13.4□□□□□ -0.26
Gm12728V9GX31 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12728V9GX31 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Gm12728V9GX31 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Gm4974-201ENSMUST00000209974 875 ntBASIC13.39□□□□□ -0.27
Gm12728V9GX31 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12728V9GX31 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Dancr-204ENSMUST00000132389 2347 ntBASIC13.38□□□□□ -0.27
Gm12728V9GX31 Gm12382-201ENSMUST00000122005 922 ntBASIC13.38□□□□□ -0.27
Gm12728V9GX31 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Gm10517-202ENSMUST00000192970 758 ntBASIC13.38□□□□□ -0.27
Gm12728V9GX31 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12728V9GX31 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Gm12728V9GX31 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.37□□□□□ -0.27
Gm12728V9GX31 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Gm12728V9GX31 Gm37292-201ENSMUST00000192062 758 ntBASIC13.37□□□□□ -0.27
Gm12728V9GX31 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms