Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Rps24-207ENSMUST00000224568 714 ntBASIC14.17□□□□□ -0.14
Six6Q9QZ28 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.17□□□□□ -0.14
Six6Q9QZ28 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.17□□□□□ -0.14
Six6Q9QZ28 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six6Q9QZ28 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Six6Q9QZ28 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.15□□□□□ -0.14
Six6Q9QZ28 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Gm10418-201ENSMUST00000100943 576 ntBASIC14.15□□□□□ -0.14
Six6Q9QZ28 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Gm13401-201ENSMUST00000117074 291 ntBASIC14.15□□□□□ -0.14
Six6Q9QZ28 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Six6Q9QZ28 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.14□□□□□ -0.15
Six6Q9QZ28 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms