Protein–RNA interactions for Protein: Q9JJS0

Scube2, Signal peptide, CUB and EGF-like domain-containing protein 2, mousemouse

Predictions only

Length 997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube2Q9JJS0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Gm18558-201ENSMUST00000186253 1214 ntBASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Gm18421-201ENSMUST00000204122 625 ntBASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube2Q9JJS0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Scube2Q9JJS0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Gm27704-201ENSMUST00000185094 107 ntBASIC17.14■□□□□ 0.33
Scube2Q9JJS0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube2Q9JJS0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.13■□□□□ 0.33
Scube2Q9JJS0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube2Q9JJS0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube2Q9JJS0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Gm45328-201ENSMUST00000210942 917 ntBASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scube2Q9JJS0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms