Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Gm5643-201ENSMUST00000117081 966 ntBASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Gm12085-201ENSMUST00000119263 940 ntBASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpf2Q9JJ80 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Gm12527-201ENSMUST00000117967 564 ntBASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Gm38027-201ENSMUST00000192315 235 ntBASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Trmt13-210ENSMUST00000198454 880 ntBASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpf2Q9JJ80 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Gm15378-201ENSMUST00000121894 207 ntBASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Gm10698-201ENSMUST00000182663 604 ntBASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpf2Q9JJ80 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpf2Q9JJ80 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpf2Q9JJ80 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms