Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4bQ9ES00 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4bQ9ES00 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4bQ9ES00 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4bQ9ES00 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms