Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.68□□□□□ -0.06
Mmp1bQ9EPL6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp1bQ9EPL6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp1bQ9EPL6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp1bQ9EPL6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp1bQ9EPL6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Gm8520-201ENSMUST00000186517 868 ntBASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp1bQ9EPL6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp1bQ9EPL6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mmp1bQ9EPL6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms