Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Rsph9Q9D9V4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Gm27741-201ENSMUST00000185060 237 ntBASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Gm18669-201ENSMUST00000216049 778 ntBASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Phf7-203ENSMUST00000226565 1971 ntBASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph9Q9D9V4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Gm28033-201ENSMUST00000184224 96 ntBASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Gm18115-201ENSMUST00000221209 621 ntBASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph9Q9D9V4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph9Q9D9V4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rsph9Q9D9V4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rsph9Q9D9V4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms