Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Gm45058-201ENSMUST00000205810 766 ntBASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4bQ9D8B3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp4bQ9D8B3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp4bQ9D8B3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp4bQ9D8B3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Mir5130-201ENSMUST00000175160 84 ntBASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Gm18959-201ENSMUST00000208954 655 ntBASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4bQ9D8B3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.88■□□□□ 0.93
Chmp4bQ9D8B3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Phf7-203ENSMUST00000226565 1971 ntBASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp4bQ9D8B3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Gm43799-201ENSMUST00000201845 579 ntBASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4bQ9D8B3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms