Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm3404Q9D506 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.68■□□□□ 0.42
Gm3404Q9D506 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Phf7-203ENSMUST00000226565 1971 ntBASIC17.68■□□□□ 0.42
Gm3404Q9D506 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3404Q9D506 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3404Q9D506 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.66■□□□□ 0.42
Gm3404Q9D506 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3404Q9D506 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm3404Q9D506 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Gm13186-201ENSMUST00000118031 316 ntBASIC17.65■□□□□ 0.42
Gm3404Q9D506 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.65■□□□□ 0.42
Gm3404Q9D506 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gm3404Q9D506 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm3404Q9D506 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.64■□□□□ 0.41
Gm3404Q9D506 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms