Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Gm15427-201ENSMUST00000117288 531 ntBASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Gm18889-201ENSMUST00000174284 929 ntBASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Gm9172-201ENSMUST00000212092 954 ntBASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Gm9899-201ENSMUST00000065519 555 ntBASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd1Q9D0E3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd1Q9D0E3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd1Q9D0E3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd1Q9D0E3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lysmd1Q9D0E3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lysmd1Q9D0E3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Gm27646-201ENSMUST00000183989 110 ntBASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd1Q9D0E3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Gm6912-201ENSMUST00000117218 544 ntBASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd1Q9D0E3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Gm12490-201ENSMUST00000120255 560 ntBASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd1Q9D0E3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Rprl2-201ENSMUST00000157150 290 ntBASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd1Q9D0E3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd1Q9D0E3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms