Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Gm37935-201ENSMUST00000192012 982 ntBASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.67■□□□□ 0.9
Nip7Q9CXK8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nip7Q9CXK8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.66■□□□□ 0.9
Nip7Q9CXK8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nip7Q9CXK8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nip7Q9CXK8 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.64■□□□□ 0.9
Nip7Q9CXK8 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Gm25925-201ENSMUST00000158314 306 ntBASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nip7Q9CXK8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Gm7506-201ENSMUST00000207758 815 ntBASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nip7Q9CXK8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms