Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Prob1-201ENSMUST00000097619 3021 ntBASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1lQ9CXF7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1lQ9CXF7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1lQ9CXF7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd1lQ9CXF7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd1lQ9CXF7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chd1lQ9CXF7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms