Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Gm6190-201ENSMUST00000220683 1374 ntBASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sec61bQ9CQS8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gm27000-201ENSMUST00000182943 842 ntBASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Gm6991-201ENSMUST00000218475 1178 ntBASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Mzt1-203ENSMUST00000227948 952 ntBASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sec61bQ9CQS8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Gm13186-201ENSMUST00000118031 316 ntBASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Rprl3-201ENSMUST00000157400 290 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms