Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.29■□□□□ 0.2
Trim16Q99PP9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.28■□□□□ 0.2
Trim16Q99PP9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.28■□□□□ 0.2
Trim16Q99PP9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim16Q99PP9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim16Q99PP9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim16Q99PP9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.26■□□□□ 0.19
Trim16Q99PP9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.26■□□□□ 0.19
Trim16Q99PP9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms