Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim8Q99PJ2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim8Q99PJ2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim8Q99PJ2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim8Q99PJ2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim8Q99PJ2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim8Q99PJ2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim8Q99PJ2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trim8Q99PJ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim8Q99PJ2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim8Q99PJ2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Gm20760-201ENSMUST00000179197 648 ntBASIC16.33■□□□□ 0.2
Trim8Q99PJ2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim8Q99PJ2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim8Q99PJ2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim8Q99PJ2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim8Q99PJ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Gm37856-201ENSMUST00000191634 999 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms