Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtn4rQ99PI8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.66□□□□□ -0.06
Rtn4rQ99PI8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Gm6345-202ENSMUST00000180900 204 ntBASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtn4rQ99PI8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn4rQ99PI8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn4rQ99PI8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn4rQ99PI8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rtn4rQ99PI8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn4rQ99PI8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms