Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Ank2-226ENSMUST00000189368 339 ntBASIC21.17■□□□□ 0.98
Rtn4Q99P72 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 AC159246.1-201ENSMUST00000214478 249 ntBASIC21.17■□□□□ 0.98
Rtn4Q99P72 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rtn4Q99P72 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4Q99P72 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.15■□□□□ 0.98
Rtn4Q99P72 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Gm13899-201ENSMUST00000121519 1255 ntBASIC21.15■□□□□ 0.98
Rtn4Q99P72 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.15■□□□□ 0.98
Rtn4Q99P72 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rtn4Q99P72 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4Q99P72 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Gm9103-201ENSMUST00000119371 405 ntBASIC21.14■□□□□ 0.97
Rtn4Q99P72 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Gm26039-201ENSMUST00000158152 144 ntBASIC21.14■□□□□ 0.97
Rtn4Q99P72 Gm5587-201ENSMUST00000206270 674 ntBASIC21.14■□□□□ 0.97
Rtn4Q99P72 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4Q99P72 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Rtn4Q99P72 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Gm29518-201ENSMUST00000190858 372 ntBASIC21.13■□□□□ 0.97
Rtn4Q99P72 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Gm18363-201ENSMUST00000221671 730 ntBASIC21.13■□□□□ 0.97
Rtn4Q99P72 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4Q99P72 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Gm11355-201ENSMUST00000121120 306 ntBASIC21.12■□□□□ 0.97
Rtn4Q99P72 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.12■□□□□ 0.97
Rtn4Q99P72 Gm27704-201ENSMUST00000185094 107 ntBASIC21.12■□□□□ 0.97
Rtn4Q99P72 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4Q99P72 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4Q99P72 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms