Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Gm2756-201ENSMUST00000195851 400 ntBASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Nkx6-1Q99MA9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm23935-201ENSMUST00000102303 57 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm24270-201ENSMUST00000102326 57 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm24245-201ENSMUST00000157318 57 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm7063-201ENSMUST00000186840 981 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gm15590-201ENSMUST00000078419 552 ntBASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx6-1Q99MA9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx6-1Q99MA9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms