Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Gm11249-201ENSMUST00000117071 859 ntBASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Gm12382-201ENSMUST00000122005 922 ntBASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd1Q99J36 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Gm42545-201ENSMUST00000202755 922 ntBASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thumpd1Q99J36 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Gm18284-201ENSMUST00000172604 624 ntBASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thumpd1Q99J36 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Thumpd1Q99J36 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Thumpd1Q99J36 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Thumpd1Q99J36 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.83□□□□□ -0.03
Thumpd1Q99J36 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Thumpd1Q99J36 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Thumpd1Q99J36 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Gm12933-201ENSMUST00000120203 872 ntBASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms