Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb6Q91XZ4 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.08■□□□□ 0.33
Pcdhb6Q91XZ4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Pcdhb6Q91XZ4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb6Q91XZ4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
Pcdhb6Q91XZ4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb6Q91XZ4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb6Q91XZ4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Gm11336-201ENSMUST00000118168 334 ntBASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Gm18421-201ENSMUST00000204122 625 ntBASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb6Q91XZ4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms