Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgb4Q91XX6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Gm30025-201ENSMUST00000218555 728 ntBASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhgb4Q91XX6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb4Q91XX6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgb4Q91XX6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Gm7370-201ENSMUST00000219471 767 ntBASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhgb4Q91XX6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms