Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhb11Q91UZ8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb11Q91UZ8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Gm44450-201ENSMUST00000199528 114 ntBASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb11Q91UZ8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb11Q91UZ8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb11Q91UZ8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Gm13216-201ENSMUST00000117145 591 ntBASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms