Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Gm44454-201ENSMUST00000198541 138 ntBASIC17.66■□□□□ 0.42
TraipQ8VIG6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.66■□□□□ 0.42
TraipQ8VIG6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.65■□□□□ 0.42
TraipQ8VIG6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TraipQ8VIG6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TraipQ8VIG6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TraipQ8VIG6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Gm43347-201ENSMUST00000200226 580 ntBASIC17.63■□□□□ 0.41
TraipQ8VIG6 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.63■□□□□ 0.41
TraipQ8VIG6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TraipQ8VIG6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Gm36967-201ENSMUST00000193814 266 ntBASIC17.62■□□□□ 0.41
TraipQ8VIG6 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.62■□□□□ 0.41
TraipQ8VIG6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TraipQ8VIG6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms