Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Q8VDP2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Q8VDP2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.3■□□□□ 0.2
Q8VDP2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Q8VDP2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.3■□□□□ 0.2
Q8VDP2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Gm43173-201ENSMUST00000202246 593 ntBASIC16.3■□□□□ 0.2
Q8VDP2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Q8VDP2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Q8VDP2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q8VDP2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.29■□□□□ 0.2
Q8VDP2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8VDP2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Q8VDP2 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.29■□□□□ 0.2
Q8VDP2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.28■□□□□ 0.2
Q8VDP2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Q8VDP2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.28■□□□□ 0.2
Q8VDP2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.28■□□□□ 0.2
Q8VDP2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Q8VDP2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.28■□□□□ 0.2
Q8VDP2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Gm26833-201ENSMUST00000180899 440 ntBASIC16.28■□□□□ 0.2
Q8VDP2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.28■□□□□ 0.2
Q8VDP2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Q8VDP2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8VDP2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8VDP2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.27■□□□□ 0.2
Q8VDP2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Q8VDP2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8VDP2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8VDP2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Q8VDP2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8VDP2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8VDP2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8VDP2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Q8VDP2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms