Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc9Q8VC31 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc9Q8VC31 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Gm40848-201ENSMUST00000221998 324 ntBASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc9Q8VC31 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc9Q8VC31 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Gm11960-202ENSMUST00000181063 2858 ntBASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc9Q8VC31 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms