Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna3Q8R4G9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Mir770-201ENSMUST00000103252 94 ntBASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Gm17808-201ENSMUST00000200859 894 ntBASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna3Q8R4G9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chrna3Q8R4G9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chrna3Q8R4G9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chrna3Q8R4G9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna3Q8R4G9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Gm11950-201ENSMUST00000121615 838 ntBASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna3Q8R4G9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna3Q8R4G9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms