Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb1Q8R3Z5 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.79■□□□□ 0.6
Cacnb1Q8R3Z5 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb1Q8R3Z5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gm18719-201ENSMUST00000196696 1413 ntBASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gm10012-202ENSMUST00000170379 372 ntBASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Gm9916-201ENSMUST00000192943 1228 ntBASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 AL929555.1-201ENSMUST00000215283 509 ntBASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb1Q8R3Z5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacnb1Q8R3Z5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacnb1Q8R3Z5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacnb1Q8R3Z5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Gm27000-201ENSMUST00000182943 842 ntBASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Gm42732-201ENSMUST00000202887 1197 ntBASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb1Q8R3Z5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Gm37751-201ENSMUST00000192440 1198 ntBASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacnb1Q8R3Z5 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacnb1Q8R3Z5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms