Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf4Q8K4J2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf4Q8K4J2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ebf4Q8K4J2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.19■□□□□ 0.02
Ebf4Q8K4J2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Gm11643-201ENSMUST00000119578 864 ntBASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf4Q8K4J2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms