Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Gm12527-201ENSMUST00000117967 564 ntBASIC10.48□□□□□ -0.73
Cystm1Q8K353 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Gm43859-201ENSMUST00000200075 1412 ntBASIC10.48□□□□□ -0.73
Cystm1Q8K353 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.47□□□□□ -0.73
Cystm1Q8K353 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm10653-202ENSMUST00000139570 835 ntBASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm22240-201ENSMUST00000175225 82 ntBASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cystm1Q8K353 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC10.46□□□□□ -0.73
Cystm1Q8K353 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cystm1Q8K353 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC10.46□□□□□ -0.74
Cystm1Q8K353 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cystm1Q8K353 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cystm1Q8K353 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cystm1Q8K353 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cystm1Q8K353 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cystm1Q8K353 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cystm1Q8K353 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms