Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn1Q8K0T0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.19■□□□□ 0.66
Rtn1Q8K0T0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn1Q8K0T0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn1Q8K0T0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn1Q8K0T0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms