Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zc3h3Q8CHP0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Gm5745-201ENSMUST00000183748 313 ntBASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h3Q8CHP0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Zc3h3Q8CHP0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h3Q8CHP0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h3Q8CHP0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Gm13616-201ENSMUST00000120600 222 ntBASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h3Q8CHP0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Zc3h3Q8CHP0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms