Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Gm8655-201ENSMUST00000221159 852 ntBASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rp1l1Q8CGM2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rp1l1Q8CGM2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rp1l1Q8CGM2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rp1l1Q8CGM2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rp1l1Q8CGM2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gm14057-201ENSMUST00000120631 482 ntBASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gm13597-201ENSMUST00000121239 375 ntBASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rp1l1Q8CGM2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms