Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Gm13884-201ENSMUST00000118103 829 ntBASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Gm12644-201ENSMUST00000119935 606 ntBASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Gm44454-201ENSMUST00000198541 138 ntBASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Gm5864-201ENSMUST00000202263 970 ntBASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rsph6aQ8CDR2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Gm15165-201ENSMUST00000118140 502 ntBASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rsph6aQ8CDR2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Mir8098-201ENSMUST00000184011 137 ntBASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Mzt1-203ENSMUST00000227948 952 ntBASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rsph6aQ8CDR2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rsph6aQ8CDR2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rsph6aQ8CDR2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rsph6aQ8CDR2 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.58■■□□□ 1.04
Rsph6aQ8CDR2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Gm28659-201ENSMUST00000188013 759 ntBASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rsph6aQ8CDR2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Gm36967-201ENSMUST00000193814 266 ntBASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rsph6aQ8CDR2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms