Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trim9Q8C7M3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Gm26039-201ENSMUST00000158152 144 ntBASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim9Q8C7M3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim9Q8C7M3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim9Q8C7M3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim9Q8C7M3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Gm11336-201ENSMUST00000118168 334 ntBASIC18.32■□□□□ 0.52
Trim9Q8C7M3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim9Q8C7M3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms