Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Gm6659-201ENSMUST00000174752 547 ntBASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nek11Q8C0Q4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nek11Q8C0Q4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Gm9013-201ENSMUST00000132939 882 ntBASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nek11Q8C0Q4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Gm5587-201ENSMUST00000206270 674 ntBASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nek11Q8C0Q4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Gm23634-201ENSMUST00000175071 91 ntBASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.68■□□□□ 0.74
Nek11Q8C0Q4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nek11Q8C0Q4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms