Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Trim35Q8C006 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim35Q8C006 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim35Q8C006 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Gm715-201ENSMUST00000117865 831 ntBASIC17.28■□□□□ 0.36
Trim35Q8C006 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Gm43183-201ENSMUST00000200632 547 ntBASIC17.28■□□□□ 0.36
Trim35Q8C006 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim35Q8C006 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim35Q8C006 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Gm12372-201ENSMUST00000121654 768 ntBASIC17.27■□□□□ 0.36
Trim35Q8C006 Gm15171-201ENSMUST00000122191 334 ntBASIC17.27■□□□□ 0.36
Trim35Q8C006 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Gm38217-201ENSMUST00000194358 910 ntBASIC17.27■□□□□ 0.36
Trim35Q8C006 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC17.27■□□□□ 0.36
Trim35Q8C006 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 AC132384.10-201ENSMUST00000217862 1204 ntBASIC17.27■□□□□ 0.36
Trim35Q8C006 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim35Q8C006 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim35Q8C006 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim35Q8C006 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim35Q8C006 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trim35Q8C006 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim35Q8C006 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim35Q8C006 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim35Q8C006 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim35Q8C006 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC17.27■□□□□ 0.35
Trim35Q8C006 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim35Q8C006 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim35Q8C006 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim35Q8C006 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim35Q8C006 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim35Q8C006 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Gm28975-201ENSMUST00000186412 686 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim35Q8C006 Gm37292-201ENSMUST00000192062 758 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 Gm42545-201ENSMUST00000202755 922 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 AC117797.1-201ENSMUST00000223977 695 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 AC154757.2-201ENSMUST00000228885 743 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Trim35Q8C006 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim35Q8C006 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms