Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Gm6433-201ENSMUST00000118634 875 ntBASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trerf1Q8BXJ2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trerf1Q8BXJ2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.52■□□□□ 0.39
Trerf1Q8BXJ2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trerf1Q8BXJ2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trerf1Q8BXJ2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trerf1Q8BXJ2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trerf1Q8BXJ2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trerf1Q8BXJ2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Gm11539-201ENSMUST00000119837 557 ntBASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trerf1Q8BXJ2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Gm13559-201ENSMUST00000120476 863 ntBASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Gm9987-201ENSMUST00000069768 567 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms