Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp43Q8BUM9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp43Q8BUM9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp43Q8BUM9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Usp43Q8BUM9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Usp43Q8BUM9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.83■□□□□ 0.29
Usp43Q8BUM9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Usp43Q8BUM9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Gm9987-201ENSMUST00000069768 567 ntBASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp43Q8BUM9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp43Q8BUM9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms