Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.07■□□□□ 0.16
Cpne3Q8BT60 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpne3Q8BT60 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Gm8520-201ENSMUST00000186517 868 ntBASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Cpne3Q8BT60 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Gm18958-201ENSMUST00000174258 762 ntBASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne3Q8BT60 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne3Q8BT60 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Timm23-208ENSMUST00000226683 750 ntBASIC16.03■□□□□ 0.16
Cpne3Q8BT60 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms