Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Gm26039-201ENSMUST00000158152 144 ntBASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sfr1Q8BP27 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sfr1Q8BP27 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sfr1Q8BP27 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sfr1Q8BP27 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sfr1Q8BP27 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sfr1Q8BP27 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sfr1Q8BP27 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Sfr1Q8BP27 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sfr1Q8BP27 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Gm10566-201ENSMUST00000086739 996 ntBASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sfr1Q8BP27 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Gm13186-201ENSMUST00000118031 316 ntBASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sfr1Q8BP27 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sfr1Q8BP27 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sfr1Q8BP27 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms