Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1bQ8BH88 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1bQ8BH88 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1bQ8BH88 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1bQ8BH88 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1bQ8BH88 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1bQ8BH88 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.08■□□□□ 0.48
Depdc1bQ8BH88 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Gm23634-201ENSMUST00000175071 91 ntBASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Il3ra-202ENSMUST00000223589 738 ntBASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.07■□□□□ 0.48
Depdc1bQ8BH88 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Gm27000-201ENSMUST00000182943 842 ntBASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Gm7791-201ENSMUST00000219066 539 ntBASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Depdc1bQ8BH88 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Gm18958-201ENSMUST00000174258 762 ntBASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Gm21362-201ENSMUST00000194272 928 ntBASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Gm18101-201ENSMUST00000215769 548 ntBASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Haglr-201ENSMUST00000100000 2085 ntBASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Depdc1bQ8BH88 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms